BioScientific Review
https://journals.umt.edu.pk/index.php/BSR
<p style="text-align: justify;">BioScientific Review (BSR) is an open-access peer-reviewed journal published on a quarterly basis. It provides a modern and multidisciplinary platform for free and fast publications broadly covering all aspects of life sciences. Research in the field of life sciences has grown at a bewildering pace during the last decade and BSR intends to publish momentous advances in all specialized areas of life sciences and bring them to light. </p>en-US<p style="text-align: justify;"><em>BSR</em> follows an open-access publishing policy and full text of all published articles is available free, immediately upon publication of an issue. The journal’s contents are published and distributed under the terms of the <a href="https://creativecommons.org/licenses/by/4.0/">Creative Commons Attribution 4.0 International</a> (<a href="https://creativecommons.org/licenses/by/4.0/">CC-BY 4.0</a>) license. Thus, the work submitted to the journal implies that it is original, unpublished work of the authors (neither published previously nor accepted/under consideration for publication elsewhere). On acceptance of a manuscript for publication, a corresponding author on the behalf of all co-authors of the manuscript will sign and submit a completed the Copyright and Author Consent Form.</p>[email protected] (Dr. M. Sohail Afzal)[email protected] (Syeda Saira Iqbal)Fri, 31 Jan 2025 10:32:22 +0000OJS 3.1.2.1http://blogs.law.harvard.edu/tech/rss60In Silico Characterization of Hypothetical Protein AZJ53_10480 in Streptococcus pneumoniae
https://journals.umt.edu.pk/index.php/BSR/article/view/5832
<p><strong>Background.</strong> <em>Streptococcus</em> <em>pneumoniae</em> is a major human pathogen responsible for serious infections such as pneumonia. Despite extensive research, many proteins in S. <em>pneumoniae</em>, including hypothetical proteins, remain uncharacterized, limiting the understanding of the bacterium's pathogenic mechanisms.</p> <p><strong>Methods. </strong>This study utilizes <em>in silico</em> tools to characterize the hypothetical protein AZJ53_10480 from S. pneumoniae. Sequence alignment and phylogenetic analysis were conducted using BLASTp and ClustalW, while PSIPRED and I-TASSER predicted the protein’s secondary and tertiary structures. Molecular docking studies were performed with AutoDock Vina to assess potential interactions with the antiviral drug sofosbuvir</p> <p><strong>Results. </strong>The <em>in silico</em> analysis revealed that the hypothetical protein AZJ53_10480 shares structural and functional similarities with viral capsid proteins of the hepatitis C virus. The protein was found to have a mixed localization, suggesting potential multifunctionality within the bacterial cell. Molecular docking studies indicated a strong binding affinity between AZJ53_10480 and sofosbuvir, suggesting that this protein could be a potential target for therapeutic intervention.</p> <p><strong>Conclusion. </strong>This study highlights structural properties and functional roles of hypothetical protein AZJ53_10480 in <em>S</em>. <em>pneumoniae</em> of . The findings suggest that AZJ53_10480 may play a role in the pathogenicity of <em> </em>this bacterium and could serve as a novel target for therapeutic development. Further experimental studies are needed to validate these findings and explore the protein's potential as a drug target.</p> <p><strong>Highlights</strong></p> <ul> <li><em>In silico</em> analysis reveals structural similarities between the hypothetical protein AZJ53_10480 and viral capsid proteins.</li> <li>Docking studies suggest AZJ53_10480 as a potential target for antiviral drugs like sofosbuvir.</li> <li>The study provides new insights into the possible pathogenic role of hypothetical proteins in <em>Streptococcus pneumoniae.</em></li> </ul>Nimra Hanif, Sehrish Arshad, Aqsa , Muhammad Asim, Amna Sadaqat Nadeem, Tanzeel ur Rehman, Nimra shafique, Raees Ahmad khan, Moeez manzor
Copyright (c) 2024 Nimra Hanif, Sehrish Arshad, Aqsa , Muhammad Asim, Amna Sadaqat Nadeem, Tanzeel ur Rehman, Nimra shafique, Raees Ahmad khan, Moeez manzor
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https://journals.umt.edu.pk/index.php/BSR/article/view/5832Mon, 23 Sep 2024 05:54:02 +0000Isolation and Characterization of Vermamoeba vermiformis from Swimming Pools in Lahore, Pakistan
https://journals.umt.edu.pk/index.php/BSR/article/view/5097
<p><strong>Background. </strong>Free-living amoebae (FLA) are common in aquatic environments and their interaction with humans can lead to significant public health risks. Many of these amoebae are opportunistic pathogens, causing infrequent yet severe diseases. <em>Vermamoeba vermiformis</em>, a widely distributed FLA, has been associated with keratitis infection, often in conjunction with <em>Acanthamoeba</em>. Furthermore, <em>V. vermiformis</em> can serve as a host for pathogenic bacteria, such as <em>Legionella pneumophila</em> and <em>Stenotrophomonas maltophilia</em>, amplifying potential health risks<em>.</em> This study aimed to investigate the presence of FLA in three (3) swimming pools situated in Lahore, Pakistan.</p> <p><strong>Methodology. </strong>A total of eighteen (18) water samples were collected from the swimming pools and filtered using 0.45μm cellulose acetate filter papers. The filter papers were carefully placed upside down on non-nutrient agar (NNA) plates seeded with heat-attenuated <em>E. coli</em>. A pure culture of FLA was obtained through repeated subculturing on NNA plates seeded with E. coli, ensuring the results' reliability and validity.</p> <p><strong>Results</strong>. Samples from all three (3) pools exhibited the presence of FLA. The isolated FLA was identified as <em>V. vermiformis</em> based on its morphological appearance under the light microscope, and molecular characterization was performed using the SSU rRNA gene sequence. The trophozoites of <em>V. vermiformis</em> were elongated and cylindrical, with a single pseudopodium, giving them a limax shape. The cysts of <em>V. vermiformis</em> had a double-walled oval and round structure. A clear hyaloplasm was observed at the anterior end of the pseudopodia of actively moving <em>V. vermiformis</em> under a light microscope.</p> <p><strong>Conclusion. </strong>SSU rRNA, gene-based, molecular characterization confirmed isolated FLA as a local isolate of <em>V. vermiformis.</em> Phylogenetic analysis indicated its close homology with <em>Echinamoeba</em>. The presence of <em>V. vermiformis</em> in swimming pool water poses a potential threat to human health, as it is an opportunistic pathogen and a well-known host of different pathogenic bacteria.</p>Muhammad Tariq Zahid, Amber Chayyan, Asmat Ullah, Ayesha Razzaq, Romassa Sajid, Atiqa Ikhlaq, Khajid Ullah Khan, Ghulam Mustafa
Copyright (c) 2024 Muhammad Tariq Zahid, Amber Chayyan, Asmat Ullah, Ayesha Razzaq, Romassa Sajid, Atiqa Ikhlaq, Khajid Ullah Khan, Ghulam Mustafa
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https://journals.umt.edu.pk/index.php/BSR/article/view/5097Fri, 11 Oct 2024 04:28:37 +0000Prevalence, In Silico Analysis and Possible Molecular Drug Therapy for Specific Meningitis Types
https://journals.umt.edu.pk/index.php/BSR/article/view/6105
<p><strong>Background. </strong>Meningitis is the inflammation of the membranes surrounding the brain and spinal cord. This study was designed to determine the prevalence of meningitis along with the docking of bacterial proteins with drugs used to treat meningitis.</p> <p><strong>Methodology. </strong>A cross-sectional study was conducted including 100 febrile seizure children admitted to the hospitals of Hyderabad, Pakistan. Demographic data was recorded via a questionnaire. Cerebrospinal fluid (CSF) and blood were analyzed clinically. Molecular docking via PyRx―a virtual screening tool―was performed and Chi-square test was applied to interpret the data.</p> <p><strong>Results. </strong>Out of the 100 patients included in the study, 32 had been diagnosed with meningitis, 53 were suspected patients, and 15 were patients of encephalitis. Among diagnosed meningitis patients, 47% had bacterial meningitis, 16% had viral meningitis, while only 9% had TBM. Moreover, 28% of patients were partially treated with a mortality rate of 18%. Low glucose levels, high protein levels, and high neutrophil count were found in cerebrospinal fluid (CSF). The majority of patients were vaccinated (48%). Meningitis was more frequent among infant children and the results were statistically significant (<em>p</em>-value = 0.01). Molecular docking revealed that ceftriaxone had the greatest affinity for bacterial proteins, while Haemophilus influenza Hia Adhesin (3syj) and Pneumolysin (5aoe) had the lowest Kd values of -9 and -8.6, respectively.</p> <p><strong>Conclusion. </strong>Bacterial meningitis was found to be the most prevalent type with 32% prevalence. Ceftriaxone could be the drug of choice if meningitis is caused by 3syj or 5aoe. However, either vancomycin or meropenem may be preferred over ceftriaxone if meningitis is caused by 1p4t (Neisserial surface protein A).</p>Beenish Khanzada, Abdul wasay Memon, Rida e Zehra Syeda, Samra Khan Bhand
Copyright (c) 2024 Beenish Khanzada, Abdul wasay Memon, Rida e Zehra Syeda, Samra Khan Bhand
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https://journals.umt.edu.pk/index.php/BSR/article/view/6105Fri, 08 Nov 2024 06:59:40 +0000Investigating the Anti-Tubercular Potential of Novel Non-Antibiotic Agents against Drug-Resistant Mycobacterium Tuberculosis
https://journals.umt.edu.pk/index.php/BSR/article/view/6124
<p><strong>Background. </strong>The ever-increasing prevalence of multidrug-resistant <em>Mycobacterium tuberculosis</em> (MDR-TB) presents an alarming challenge to existing tuberculosis (TB) treatment stratgies. Hence, the current study explores the potential of dihydroergotamine and abiraterone acetate, two non-antibiotic compounds, as innovative anti-tubercular agents.</p> <p><strong>Methods. </strong><em>In silico</em> analyses were conducted to identify potential drug targets for dihydroergotamine and abiraterone acetate. Subsequently, these compounds were evaluated for their bactericidal efficacy against both the reference H37Rv strain and an MDR-TB strain of <em>M. tuberculosis</em> <em>in vitro.</em> A range of drug concentrations were tested to determine their inhibitory effects.</p> <p><strong>Results.</strong> Both dihydroergotamine and abiraterone acetate exhibited substantial inhibitory activity against <em>M. tuberculosis</em>. Dihydroergotamine demonstrated efficacy at higher concentrations (128 µg and 256 µg), while abiraterone acetate exhibited potency at lower concentrations (64 µg, 128 µg, and 256 µg). The observed dose-dependent inhibitory effect emphasizes the importance of optimizing drug concentrations in anti-tubercular therapy.</p> <p><strong>Conclusion.</strong> Both compounds act as potential anti-tubercular agents by effectively inhibiting the growth of <em>M. tuberculosis</em>, with abiraterone acetate demonstrating greater potency at lower concentrations. These findings suggest both compounds may be promising candidates for further research and development as potential treatments for tuberculosis.</p>Muhammad Fayaz Khan, Abdul Jabbar
Copyright (c) 2024 Muhammad Fayaz Khan, Abdul Jabbar
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https://journals.umt.edu.pk/index.php/BSR/article/view/6124Mon, 04 Nov 2024 06:39:25 +0000Efficacy of Charcoal and Water Based Formulations of Bacillus subtilis to Promote the Growth of Triticum aestivum (L.)
https://journals.umt.edu.pk/index.php/BSR/article/view/4821
<p><strong>Background.</strong> Plant growth-promoting rhizobacteria (PGPR) are used with different carrier materials that provide habitat and nutrients to the bacteria. Charcoal is an important carrier material which also acts as the source of carbon for microorganisms.</p> <p><strong>Objective. </strong>This study aims to analyze the effects of charcoal and water-based formulations of <em>Bacillus subtilis</em> on the growth parameters of wheat plant, namely <em>Triticum aestivum</em> L. </p> <p><strong>Methodology. </strong>Five strains of <em>B. subtilis </em>were selected including Z-12, Z-16, Z-24, Z-44, and Z-66. The cellular morphology of the strains was examined by performing Gram and endospore staining. For their further characterization, several biochemical tests were performed. Strains were evaluated for auxin production by growing them in Luria-Bertani (LB) broth, supplemented with 0, 400, and 800 μg/ml concentrations of L-tryptophan. Charcoal and water-based formulations of single and mixed cultures, namely C1 (Z-12, Z-44, Z-66), C2 (Z-12, Z-16, Z-24), and C3 (Z-16, Z-44, Z-66) were applied to soil and seeds, respectively. Multiple growth parameters were examined under laboratory and natural conditions including root length, shoot length, fresh weight, dry weight, tillers, spike length, and seed weight.</p> <p><strong>Results. </strong>Colorimetric analyses revealed strains Z-44 and Z-66 as more active in auxin production. Under laboratory conditions (water-based), mixed culture C1 showed maximum improvement in all parameters. Among water-based formulations, mixed cultures C1 and C3 successfully exhibited maximum growth under natural conditions. Among charcoal-based formulations, strains Z-12 and Z-24 recorded maximum improvement in seed weight and spikelet count at the final harvesting stage.</p> <p><strong>Conclusion.</strong> The study concluded that both types of PGPR formulations significantly enhanced the growth parameters of wheat.</p>Shafqat Nawaz, Sana Tanveer, Basharat Ali
Copyright (c) 2024 Sana Tanveer, Basharat Ali
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https://journals.umt.edu.pk/index.php/BSR/article/view/4821Sat, 16 Nov 2024 05:57:41 +0000Influence of Calcium and Phosphorous Ratio on Hematology and Muscle Proximate Composition of Hypophthalmichthys molitrix Fingerlings
https://journals.umt.edu.pk/index.php/BSR/article/view/6355
<p><strong>Background. </strong>Calcium (Ca) and phosphorous (P) are essential minerals for fish growth and development, but Ca absorption from water is limited and its presence also influences P absorption. Therefore, dietary Ca and P are vital for fish to perform physiological activities efficiently.</p> <p><strong>Methodology.</strong> This study investigated the interactive effect of Ca and P ratio (Ca:P) on muscle proximate composition and hematology of <em>Hypophthalmichthys molitrix </em>fingerlings (average initial weight = 13.7 ± 0.05 g) for 90 days. Calcium lactate and sodium di-phosphate were used as Ca and P sources. A total of 9 isonitrogenous, isolipidic, and isocaloric diets were formulated by combining 3 Ca levels (0%, 1%, and 2%) with three P levels (0%, 1%, and 2%) and fed to fish twice a day at 5% body weight.</p> <p><strong>Results.</strong> The results showed that moisture and crude protein content in muscles significantly increased (p<0.05) the interactive effect of Ca and P except fat and ash content (p>0.05). Furthermore, the hematological parameters of fingerlings remained unaffected (p>0.05) by the individual supplementation of Ca. However, P supplementation significantly affected the MCV, MHCH, and PLT count. Moreover, the interactive supplementation of Ca and P did not show a significant effect except HCT and MHCH. Platelets count increased at 1% of Ca and 1% of P supplementation, while the RBC count increased at 2% and 1 to 2% (Ca/P). The remaining blood counts did not show considerable variation upon supplementation of Ca/P at different levels.</p> <p><strong>Conclusion.</strong> It was concluded that mineral supplementation showed promising results at 1:2 (Ca/P) level for the optimum performance of <em>H. molitrix</em>.</p>Mahnoor Arshad, Mahroze Fatima, Ayesha Khizar, Haseeba Ishtiaq, Muhammad Adnan Ali, Muhammad Omer Gulzar
Copyright (c) 2024 Mahnoor Arshad, Mahroze Fatima, Ayesha Khizar, Haseeba Ishtiaq, Muhammad Adnan Ali, Muhammad Omer Gulzar
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https://journals.umt.edu.pk/index.php/BSR/article/view/6355Fri, 03 Jan 2025 07:10:03 +0000Effects of Preloading with High Dose of Atorvastatin Prior to Percutaneous Coronary Intervention: A Single Center Randomized Controlled Trial
https://journals.umt.edu.pk/index.php/BSR/article/view/6203
<p><strong>Background. </strong>Percutaneous coronary intervention (PCI) establishes the blood flow back to the heart. However, it can damage myocardium, leading to various cardiovascular events. Atorvastatin have beneficial pleiotropic cardiovascular effects, in addition to their lipid-lowering effects. Little work has been conducted with regard to its preloading in developing countries. This study aimed to analyze the effects of statin preloading in patients undergoing PCI in terms of reduction in major adverse cardiovascular events (MACE).</p> <p><strong>Methodology.</strong> This randomized controlled study was conducted at the Punjab Institute of Cardiology, Lahore for 6 months. A total of 186 patients undergoing elective PCI were included through non-probability consecutive sampling. Informed consent and demographic information were obtained. Two groups were formed, that is, the experimental group (receiving 80 mg atorvastatin prior to PCI) and the control group (not receiving atorvastatin before PCI). All patients were followed up at the intervals of 24 hours, 48 hours, and 1 month. MACE was calculated and data was analyzed in SPSS 26.0.</p> <p><strong>Results. </strong>The current study showed that the average age of participants was 55.10 ± 8.69 (age range 32-71 years). A total of 155 (83.33%) male participants and 31 (16.67%) female participants were enrolled for the study. Among the participants, there were 115 (61.8%) patients with diabetes mellitus, 102 (54.8%) with hypertension, 76 (40.9%) with dyslipidemia, and 91(48.9%) had a history of IHD. There were 10 patients who had major cardiovascular events. So, MACE came out to be 5.4%. Comparing both the groups, there were 2/93 (2.1%) patients in the experimental group who had MACE, whereas 8/93 (8.6%) patients had MACE in the control group. This difference was not statistically significant (<em>p</em>-value = 0.1).</p> <p><strong>Conclusion. </strong>Atorvastatin preloading before PCI reduces MACE by improving the perfusion of the myocardium.</p>Sarmad Zahoor, Samra Yasmin, Zia ur Rehman Hashmi, Hafiz Mudabbar Mahboob, Muhammad Ali Khawaja, Sadia Iqbal
Copyright (c) 2024 Sarmad Zahoor, Samra Yasmin, Zia ur Rehman, Hafiz Mudabbar Mahboob, Muhammad Ali Khawaja, Sadia Iqbal, Sadia Iqbal
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https://journals.umt.edu.pk/index.php/BSR/article/view/6203Tue, 21 Jan 2025 11:23:26 +0000Genetic Genetic Variability of Xanthomonas citri pv. citri in South Punjab, Pakistan
https://journals.umt.edu.pk/index.php/BSR/article/view/6593
<p><strong>Background. </strong>Citrus is an important nutritious fruit that belongs to the family Rutaceae, comprising a large group of trees and shrubs. Citrus constitutes about 40% of all fruits grown in Pakistan. The total contribution of kinnow, grown in Pakistan, in the international market is US$ 222 million. In Pakistan, citrus production has been recorded up to 2.0 million metric tons. There are multiple abiotic and biotic factors involved in the low productivity of citrus in the country. Moreover, citrus canker (caused by the pathogen <em>Xanthomonas citri </em>pv.<em> citri) </em>has been the major threat for citrus production in Pakistan for the last 10 years. The current study aims to document the disease incidence of citrus canker along with the characterization of citrus canker causal organism.</p> <p><strong>Method.</strong> Samples exhibiting disease symptoms (such as small pimple-like spots about 1 mm in diameter and yellow in colour) were collected from the target areas. After isolation and purification, the samples were subjected to PCR analysis for molecular identification and characterization through SDT and MEGA11 software packages.</p> <p><strong>Results.</strong> A total of 112 samples were collected from different sites in South Punjab, Pakistan. The bacterial colonies were small and yellow in color, which turned pink after staining. Bubble formation was also observed after conducting biochemical tests. Genetic analysis showed that <em>Xanthomonas citri </em>pv. <em>citri</em> Multan isolate has 98.91% nucleotide identity with Indian, Korean, Chinese, and South African isolates.</p> <p><strong>Conclusion.</strong> The study underlines the emerging pathogen population of citrus canker that could help to manage this disease.</p>Sufyan Raza, Hasan Riaz, Faheem Zia, Seema Kanwal, Sabeeh Khan, Muhammad Hassan, Sami Ullah, Mirza Abdul Qayyum, Nadeem Ahmed, Muhammad Imran, Muhammad Shahzad Zafar, Maryam Zain
Copyright (c) 2024 Dr. Hasan Riaz
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https://journals.umt.edu.pk/index.php/BSR/article/view/6593Fri, 24 Jan 2025 06:37:24 +0000Screening Enterococcus Isolates for Antimicrobial and In Vitro Antitumor Activity against Colorectal Carcinoma
https://journals.umt.edu.pk/index.php/BSR/article/view/6633
<p><strong>Background</strong>.<em> Enterococci</em> are a part of the natural intestinal flora of humans and animals and play an important role in keeping the microbial balance in the gut. Many species of <em>Enterococci</em> are also used as probiotics that produce vitamins, stimulate the immune response, and maintain the integrity of the gut. The use of dietary supplements to reinforce some gut flora components is a current aspect of functional food sciences to treat various diseases.</p> <p><strong>Methodology</strong>. In the current study, 21 <em>Enterococcus</em> strains were isolated and identified morphologically, biochemically, and physiologically. The strains were analyzed for their metabolomics potential by using thin layer chromatography (TLC) and high-performance liquid chromatography (HPLC) analyses, while the disc diffusion method was employed to assess their antibacterial potential against the known pathogens. The <em>in vitro</em> antitumor activity was determined against HCT 116 colorectal carcinoma (CRC) cell lines at different concentrations including 12 mg/ml, 25 mg/ml, 50 mg/ml, and 100 mg/ml.</p> <p><strong>Results</strong>. Out of the 21 strains, 9 showed antimicrobial activity against <em>Pseudomonas, Enterobacter, Klebsiella</em>, and <em>Staphylococcus</em>. Several strains showed sensitivity against certain antibiotics, such as amoxicillin, norfloxacin, streptomycin, vancomycin, and nalidixic acid. The crude extracts of the isolates also showed high cytotoxicity against <em>Artemia salina</em> and significant antitumor activity against HCT 116 colorectal carcinoma CRC cell lines. The crude extracts of these <em>Enterococcus </em>strains exhibited the presence of a variety of bioactive metabolites by using TLC and HPLC analysis.</p> <p><strong>Conclusion</strong>. The study revealed that the antimicrobial compounds produced by these bioactive <em>Enterococcus</em> strains can be used against <em>Pseudomonas, Enterobacter, Klebsiella</em>, and <em>Staphylococcus</em>. Moreover, these strains can be investigated as potential probiotic agents to treat colorectal cancer because of their significant <em>in vitro</em> antitumor activity against CRC.</p>Ayesha Siddiqa, Ashba Hassan, Shahid Nawaz, Imran Sajid
Copyright (c) 2024 Ayesha Siddiqa, Ashba Hassan, Shahid Nawaz, Imran Sajid
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https://journals.umt.edu.pk/index.php/BSR/article/view/6633Fri, 24 Jan 2025 08:11:49 +0000 Potential Benefits of Pomegranate as an Additive in Fish Diet and Fish Products: A Review
https://journals.umt.edu.pk/index.php/BSR/article/view/5348
<p>Pomegranate (<em>Punica granatum)</em>, commonly known as “Anar”, is an ancient fruit. It is preferably consumed due to its pleasing taste and high nutritious value along with some other associated health benefits. These benefits are not only meant for human beings, however, also for the fish. In recent times, scientific interest in pomegranate and its consumption has increased due to its numerous health benefits. Therefore, the current study aimed to review the most recent literature on different properties of the pomegranate. These properties include antimicrobial and antioxidant activities, its effect on hematological and growth parameters along with the role of pomegranate as a preservative in fish and fish products. The current study evaluated previously conducted studies to determine the effect of pomegranate on different systems of fish. Results showed that the intake of pomegranate effectively increased the growth of juvenile fish and dietary value of fish, boosted the hematological and immune responses, as well as feed efficiency and antioxidant activity. Moreover, it also showed antioxidant properties and proved effective for the preservation of fish fillets by reducing lipid oxidation, chemical degradation, and microbial growth in stored fish. Therefore, the incorporation of pomegranate in fish food has numerous applications. However, additional research is required to ascertain the safe limits.</p>Meerub Sarfraz, Mamoona Mahmood, Moazama Batool, Qurat-UL- Ain, Sadia Maalik, Sajida Mushtaq
Copyright (c) 2024 Meerub Sarfraz, Mamoona Mahmood, Moazama Batool, Qurat-UL- Ain, Sadia Maalik, Sajida Mushtaq
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https://journals.umt.edu.pk/index.php/BSR/article/view/5348Sat, 16 Nov 2024 06:43:02 +0000Impact of Cathepsin L Inhibition in SARS-CoV-2 Infection and Potential Therapeutic Interventions
https://journals.umt.edu.pk/index.php/BSR/article/view/5854
<p><strong>Background. </strong>The global COVID-19 pandemic caused by SARS-CoV-2 has prompted the urgent development of effective therapeutic strategies since its emergence in China. Cathepsin L is a lysosomal cysteine protease that plays a pivotal role in the entry of SARS-CoV-2 into the host cell. It follows an endocytic pathway that triggers the fusion of host and viral cell membranes.</p> <p><strong>Mechanism.</strong> Viral RNA is released during this phase and enters the host's cytoplasm through cleavage at S1/S2 or S2′ sites of the Spike glycoprotein of SARS-CoV-2. A study showed K790 as the potential cleavage site for cathepsin L. It is located near the S2′ site on the same loop. Its potential for proteolysis indicates its capacity to induce structural modifications analogous to S2′ cleavage, ultimately activating membrane fusion to allow the entry of the virus. The inhibitors of cathepsin L have emerged as effective drug targets in antiviral therapy.</p> <p><strong>Conclusion.</strong> This study aims to elaborate on the potential role of cathepsin L in SARS-CoV-2 infection during its entry into the host cells and also explores its functional and structural biology. Additionally, it highlights several promising inhibitory compounds including K11777, E64d, SDI 26681509, CID23631927, and Gallinamide A, which are effective in treating the SARS-CoV-2 infection. US Food and Drug Administration (FDA) approved drugs including amantadine, teicoplanin, and chloroquine have the potential to combat the SARS-CoV-2 infection. Understanding the significance of cathepsin L and the use of its inhibitors as therapeutic agents may open new opportunities for developing effective treatments for SARS-CoV-2.</p>Muteeba Azhar, Asma Irshad, Ansar Zubair, Tahira Batool, Ammara Maqsood, Mehreen Saleem, Rida Bashir
Copyright (c) 2024 Muteeba Azhar, Asma Irshad, Mehreen Saleem, Tahira Batool
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https://journals.umt.edu.pk/index.php/BSR/article/view/5854Wed, 08 Jan 2025 06:09:26 +0000Evaluating the Risk Factors and Bidirectional Association of Urinary Tract Infections in Diabetes Mellitus
https://journals.umt.edu.pk/index.php/BSR/article/view/4770
<p><strong>Background.</strong> Urinary tract infections (UTIs) are the most predominant among people with diabetes mellitus (DM), with significant implications for morbidity and mortality. Various microbial agents, including bacteria, fungi, and viruses, contribute to UTIs in diabetic patients.</p> <p><strong>Objective.</strong> This review aims to examine the association between UTIs and DM, focusing on pathogenic mechanisms, risk factors, and clinical implications.</p> <p><strong>Methods.</strong> A comprehensive literature review was conducted to gather data on UTIs in diabetic patients. Relevant articles gathered from various databases, such as PubMed, Google Scholar, Semantic Scholar, and ScienceDirect were analyzed for insights into microbial colonization, pathogenic mechanisms, and epidemiological trends.</p> <p><strong>Results.</strong> Microorganisms commonly implicated in diabetic UTIs include <em>Escherichia coli, Proteus</em><em> mirabilis, Enterobacter </em>spp<em>.,</em> and <em>Klebsiella </em><em>spp</em>. Elevated urinary glucose levels provide a conducive environment for microbial growth, contributing to increased infection rates. Risk factors such as female sex, obesity, glycosuria, immunosuppression, and diabetic complications (such as nephropathy and cystopathy) further exacerbate susceptibility.</p> <p><strong>Conclusion.</strong> The incidence of UTIs in diabetic populations is rising globally, provoked by antibiotic resistance among uropathogens such as Gram-negative bacteria including <em>Escherichia coli</em> (65-80%), trailed by <em>Pseudomonas aeruginosa</em>, <em>Proteus mirabilis</em> (2-6%), and <em>Klebsiella </em>spp. (3.5-13%). Whereas, Gram-positive bacteria include <em>Staphylococcus </em>spp. (4-6%), GBS (3%), <em>Enterococcus faecalis</em> (4-7%), and <em>Candida</em> (1%).</p>Haris Riaz Khan, Usman Ayub Awan, Naila Qamar, Noman Ahmed, Tahira Sher Afghan, Beena Gul, Aliya Khan, Sohail Sajid
Copyright (c) 2024 Haris Riaz Khan Khan, Naila Qamar
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https://journals.umt.edu.pk/index.php/BSR/article/view/4770Wed, 29 Jan 2025 08:32:04 +0000